Eye tracker - Revision history

imported>Gordonam at 23:44, 6 November 2013

2013-11-06T23:44:22Z

← Older revision		Revision as of 23:44, 6 November 2013
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	You will need a calibration script. See [https://github.com/cni/StimPack/tree/master/psychopy/eye_calibrate our example] in [http://www.psychopy.org/ PsychoPy].		You will need a calibration script. See [https://github.com/cni/StimPack/tree/master/psychopy/eye_calibrate our example] in [http://www.psychopy.org/ PsychoPy].

	~~==Setup==~~
	~~Before the subject enters the scanner, you should:~~
	~~# Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.~~
	~~# Turn the LCD circuit on~~
	~~# If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.~~
	~~# Affix the illuminator to the scanner bed.~~

	~~==Viewing the subject's eye==~~
	After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:

	~~# Connect your stimulus presentation computer to one of the CNI's scanner display screens.~~
	# Run a calibration script on your stimulus presentation computer. An example calibration script for Matlab Psychtoolbox, by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].
	# Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.
	~~# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.~~

	Note that the subject's eye may also be occluded by the mirrors or coil. Often, when the dorsal part of a subject's head is flush with the 32 channel coil, the camera will not have view of her eyes. To rectify this, ask the subject to scoot out of the scanner, 1 cm at a time, until you can see her eyes.

	~~==Adjusting the Pupil and Corneal Thresholds==~~
	# Adjust the pupil threshold, using the arrows in the top left corner of the Camera Setup screen. The threshold should be set such that the subject's pupils are optimally labeled in dark blue, with minimal labeling in the areas immediately outside the eye. When a pupil is detected, you will see a message indicating "PUPIL OK" in green.
	# Adjust the CR (corneal reflection) threshold, using the arrows in the top left corner of the Camera Setup screen. When corneal reflection is detected, you will see a message indicating "CR OK" The threshold should be set such that "CR OK" is displayed when subjects look at each region of the display screen.

	~~==Calibrating==~~
	~~Now you can run a calibration, to give Eyelink parameters to help it guess where the subject is looking, in screen coordinates.~~

	# Run the calibration script on your presentation computer, and display it on the scanner presentation screen. Again, a sample calibration script is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].
	~~# Press "Calibrate" on the Eyelink computer. A dot will appear in the center of the screen. When the subject is fixating on it, select "accept fixation."~~
	~~# Now Eyelink will complete the calibration process. Dots will appear at various points of the screen, and the subject is required to fixate on each presented dot.~~
	# After calibration is complete press "accept." Then, validate the calibration by pressing "Validate." Another run of dot presentation will be conducted, and measurements will be computed indicating the error between estimated points of fixation for the calibration and validation runs. Based on the computed error, Eyelink will label the validation as "good" "fair" or "poor." If you are satisfied with the precision of your measurement, click "accept." Otherwise, you can repeat the full calibration and validation process.

	~~==Running your study==~~
	Now you are ready to run your study. You can update your presentation scripts to include code that communicates with Eyelink, in order to label trials and download data from the Eyelink computer. For more info about the Eyelink system, you can view the Eyelink [http://pages.uoregon.edu/prd/Eyelink/EyeLink%201000%20User%20Manual%201.3.0.pdf manual.]

imported>Gordonam at 23:37, 6 November 2013

2013-11-06T23:37:45Z

← Older revision		Revision as of 23:37, 6 November 2013
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	==Running your study==		==Running your study==
	Now you are ready to run your study. You can update your presentation scripts to include code that communicates with Eyelink, in order to label trials and download data from the Eyelink computer.		Now you are ready to run your study. You can update your presentation scripts to include code that communicates with Eyelink, in order to label trials and download data from the Eyelink computer. For more info about the Eyelink system, you can view the Eyelink [http://pages.uoregon.edu/prd/Eyelink/EyeLink%201000%20User%20Manual%201.3.0.pdf manual.]

imported>Gordonam at 23:29, 6 November 2013

2013-11-06T23:29:02Z

← Older revision		Revision as of 23:29, 6 November 2013
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	# Now Eyelink will complete the calibration process. Dots will appear at various points of the screen, and the subject is required to fixate on each presented dot.		# Now Eyelink will complete the calibration process. Dots will appear at various points of the screen, and the subject is required to fixate on each presented dot.
	# After calibration is complete press "accept." Then, validate the calibration by pressing "Validate." Another run of dot presentation will be conducted, and measurements will be computed indicating the error between estimated points of fixation for the calibration and validation runs. Based on the computed error, Eyelink will label the validation as "good" "fair" or "poor." If you are satisfied with the precision of your measurement, click "accept." Otherwise, you can repeat the full calibration and validation process.		# After calibration is complete press "accept." Then, validate the calibration by pressing "Validate." Another run of dot presentation will be conducted, and measurements will be computed indicating the error between estimated points of fixation for the calibration and validation runs. Based on the computed error, Eyelink will label the validation as "good" "fair" or "poor." If you are satisfied with the precision of your measurement, click "accept." Otherwise, you can repeat the full calibration and validation process.

			==Running your study==
			Now you are ready to run your study. You can update your presentation scripts to include code that communicates with Eyelink, in order to label trials and download data from the Eyelink computer.

imported>Gordonam at 23:22, 6 November 2013

2013-11-06T23:22:47Z

← Older revision		Revision as of 23:22, 6 November 2013
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	# Adjust the pupil threshold, using the arrows in the top left corner of the Camera Setup screen. The threshold should be set such that the subject's pupils are optimally labeled in dark blue, with minimal labeling in the areas immediately outside the eye. When a pupil is detected, you will see a message indicating "PUPIL OK" in green.		# Adjust the pupil threshold, using the arrows in the top left corner of the Camera Setup screen. The threshold should be set such that the subject's pupils are optimally labeled in dark blue, with minimal labeling in the areas immediately outside the eye. When a pupil is detected, you will see a message indicating "PUPIL OK" in green.
	# Adjust the CR (corneal reflection) threshold, using the arrows in the top left corner of the Camera Setup screen. When corneal reflection is detected, you will see a message indicating "CR OK" The threshold should be set such that "CR OK" is displayed when subjects look at each region of the display screen.		# Adjust the CR (corneal reflection) threshold, using the arrows in the top left corner of the Camera Setup screen. When corneal reflection is detected, you will see a message indicating "CR OK" The threshold should be set such that "CR OK" is displayed when subjects look at each region of the display screen.

			==Calibrating==
			Now you can run a calibration, to give Eyelink parameters to help it guess where the subject is looking, in screen coordinates.

			# Run the calibration script on your presentation computer, and display it on the scanner presentation screen. Again, a sample calibration script is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].
			# Press "Calibrate" on the Eyelink computer. A dot will appear in the center of the screen. When the subject is fixating on it, select "accept fixation."
			# Now Eyelink will complete the calibration process. Dots will appear at various points of the screen, and the subject is required to fixate on each presented dot.
			# After calibration is complete press "accept." Then, validate the calibration by pressing "Validate." Another run of dot presentation will be conducted, and measurements will be computed indicating the error between estimated points of fixation for the calibration and validation runs. Based on the computed error, Eyelink will label the validation as "good" "fair" or "poor." If you are satisfied with the precision of your measurement, click "accept." Otherwise, you can repeat the full calibration and validation process.

imported>Gordonam: /* Viewing the subject's eye */

2013-11-06T23:11:47Z

Viewing the subject's eye

← Older revision		Revision as of 23:11, 6 November 2013
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	# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.		# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.

	Note that the subject's eye may also be occluded by the mirrors or coil. Often, when the dorsal part of a subject's head is flush with the 32 channel coil, the camera will not have view of her eyes. To rectify this, ask the subject to scoot out 1 cm at a time, until you can see her eyes.		Note that the subject's eye may also be occluded by the mirrors or coil. Often, when the dorsal part of a subject's head is flush with the 32 channel coil, the camera will not have view of her eyes. To rectify this, ask the subject to scoot out of the scanner, 1 cm at a time, until you can see her eyes.

			==Adjusting the Pupil and Corneal Thresholds==
			# Adjust the pupil threshold, using the arrows in the top left corner of the Camera Setup screen. The threshold should be set such that the subject's pupils are optimally labeled in dark blue, with minimal labeling in the areas immediately outside the eye. When a pupil is detected, you will see a message indicating "PUPIL OK" in green.
			# Adjust the CR (corneal reflection) threshold, using the arrows in the top left corner of the Camera Setup screen. When corneal reflection is detected, you will see a message indicating "CR OK" The threshold should be set such that "CR OK" is displayed when subjects look at each region of the display screen.

imported>Gordonam at 23:01, 6 November 2013

2013-11-06T23:01:49Z

← Older revision		Revision as of 23:01, 6 November 2013
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	# Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.		# Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.
	# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.		# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.

			Note that the subject's eye may also be occluded by the mirrors or coil. Often, when the dorsal part of a subject's head is flush with the 32 channel coil, the camera will not have view of her eyes. To rectify this, ask the subject to scoot out 1 cm at a time, until you can see her eyes.

imported>Gordonam: /* Setup */

2013-11-06T22:59:02Z

Setup

← Older revision		Revision as of 22:59, 6 November 2013
Line 13:		Line 13:
	==Setup==		==Setup==
	Before the subject enters the scanner, you should:		Before the subject enters the scanner, you should:
	#* Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.		# Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.
	#* Turn the LCD circuit on		# Turn the LCD circuit on
	#* If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.		# If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.
	#* Affix the illuminator to the scanner bed.		# Affix the illuminator to the scanner bed.

	==Viewing the subject's eye==		==Viewing the subject's eye==

imported>Gordonam: /* Viewing the subject's eye */

2013-11-06T22:58:52Z

Viewing the subject's eye

← Older revision		Revision as of 22:58, 6 November 2013
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	After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:		After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:

	#* Connect your stimulus presentation computer to one of the CNI's scanner display screens.		# Connect your stimulus presentation computer to one of the CNI's scanner display screens.
	#* Run a calibration script on your stimulus presentation computer. An example calibration script for Matlab Psychtoolbox, by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].		# Run a calibration script on your stimulus presentation computer. An example calibration script for Matlab Psychtoolbox, by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].
	#* Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.		# Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.
	#* Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.		# Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.

imported>Gordonam at 22:58, 6 November 2013

2013-11-06T22:58:12Z

← Older revision		Revision as of 22:58, 6 November 2013
Line 13:		Line 13:
	==Setup==		==Setup==
	Before the subject enters the scanner, you should:		Before the subject enters the scanner, you should:
	1) Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.		#* Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.
	2) Turn the LCD circuit on		#* Turn the LCD circuit on
	3) If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.		#* If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.
	4) Affix the illuminator to the scanner bed.		#* Affix the illuminator to the scanner bed.

	==Viewing the subject's eye==		==Viewing the subject's eye==
	After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:		After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:

	1) Connect your stimulus presentation computer to one of the CNI's scanner display screens.		#* Connect your stimulus presentation computer to one of the CNI's scanner display screens.
	2) Run a calibration script. An example calibration script for Matlab Psychtoolbox, ~~written~~ by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].		#* Run a calibration script on your stimulus presentation computer. An example calibration script for Matlab Psychtoolbox, by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].
			#* Select 'Display Image' on the Eyelink computer. Now the image of the subject's eye will be displayed on the screen in the scanner. Using the left and right arrow keys on the Eyelink computer, you can toggle a large or small angle shot. When initially searching for the eye, it's helpful to use the large angle shot.
			#* Now you can adjust the angle of the eye tracker camera, checking the screen behind you, until you see the subject's eye.

imported>Gordonam at 22:52, 6 November 2013

2013-11-06T22:52:24Z

← Older revision		Revision as of 22:52, 6 November 2013
Line 10:		Line 10:

	You will need a calibration script. See [https://github.com/cni/StimPack/tree/master/psychopy/eye_calibrate our example] in [http://www.psychopy.org/ PsychoPy].		You will need a calibration script. See [https://github.com/cni/StimPack/tree/master/psychopy/eye_calibrate our example] in [http://www.psychopy.org/ PsychoPy].

			==Setup==
			Before the subject enters the scanner, you should:
			1) Turn the eye-tracker computer on, and select 'Eyelink' as the startup operating system.
			2) Turn the LCD circuit on
			3) If using the 32 channel coil, make sure the subject's eyes are roughly in the center of the eye-holes of the coil.
			4) Affix the illuminator to the scanner bed.

			==Viewing the subject's eye==
			After the subject has entered the scanner, go to the 'Camera Setup' screen of the Eyelink software interface. This is the default screen after you turn the Eyelink computer on. Check if you have a view of the illuminated eye (typically the left eye). If you cannot see this eye, you may need to adjust the camera position. To do this:

			1) Connect your stimulus presentation computer to one of the CNI's scanner display screens.
			2) Run a calibration script. An example calibration script for Matlab Psychtoolbox, written by Karen LaRocque, adapted from scripts by the Grill-Spector Lab is [https://github.com/amgordon/OldNewResponseModality/blob/master/script/calibrationSimple.m/ here].