Historical Information - Revision history

Laimab at 00:22, 3 November 2025

2025-11-03T00:22:00Z

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	'''[https://doi.org/10.1016/j.neuroimage.2021.118430 Frequency drift in MR spectroscopy at 3T] Hui et al. Frequency drift in MR spectroscopy at 3T https://doi.org/10.1016/j.neuroimage.2021.118430'''		'''[https://doi.org/10.1016/j.neuroimage.2021.118430 Frequency drift in MR spectroscopy at 3T] Hui et al. Frequency drift in MR spectroscopy at 3T https://doi.org/10.1016/j.neuroimage.2021.118430'''


			sLaser references -

			8] Young Woo Park, Dinesh K. Deelchand, James M. Joers, Brian Hanna, Adam Berrington, Joseph S. Gillen, Kejal Kantarci, Brian J. Soher, Peter B. Barker, HyunWook Park, Gulin Oz, Christophe Lenglet (2018) AutoVOI: real-time automatic prescription of volume-of-interest for single voxel spectroscopy, Magn. Reson. Med. 80:1787–1798 https://doi.org/10.1002/mrm.27203

			[9] Scheenen TWJ, Klomp DWJ, Wijnen JP, Heerschap A. (2018) Short echo time 1H-MRSI of the human brain at 3T with minimal chemical shift displacement errors using adiabatic refocusing pulses, Magn. Reson. Med. 59(1):1-6 https://doi.org/10.1002/mrm.21302

			[10] Oz G, Tkac I. (2011) Short-echo, single-shot, full-intensity proton magnetic resonance spectroscopy for neurochemical profiling at 4 T: validation in the cerebellum and brainstem, Magn. Reson. Med. 65(4):901-910 https://doi.org/10.1002/mrm.22708

			[11] Martin Wilson, Ovidiu Andronesi, Peter B. Barker, Robert Bartha, Alberto Bizzi, Patrick J. Bolan, Kevin M. Brindle, In-Young Choi, Cristina Cudalbu, Ulrike Dydak, Uzay E. Emir, Ramon G. Gonzalez, Stephan Gruber, Rolf Gruetter, Rakesh K. Gupta, Arend Heerschap, Anke Henning,Hoby P. Hetherington, Petra S. Huppi, Ralph E. Hurd, Kejal Kantarci, Risto A Kauppinen, Dennis W. J. Klomp, Roland Kreis, Marijn J. Kruiskamp, Martin O. Leach, Alexander P. Lin, Peter R. Luijten, Malgorzata Marjanska, Andrew A. Maudsley, Dieter J. Meyerhoff, Carolyn E. Mountford, Paul G. Mullins, James B. Murdoch, Sarah J. Nelson, Ralph Noeske, Gulin Oz, Julie W. Pan, Andrew C. Peet, Harish Poptani, Stefan Posse, Eva-Maria Ratai, Nouha Salibi, Tom W. J. Scheenen, Ian C. P. Smith, Brian J. Soher, Ivan Tkac, Daniel B. Vigneron, Franklyn A. Howe (2019) Methodological consensus on clinical proton MRS of the brain:Review and recommendations, Magn. Reson. Med. 82:527–550 https://doi.org/10.1002/mrm.27742

			[12] Dinesh K. Deelchand, Adam Berrington, Ralph Noeske, James M. Joers, Arvin Arani, Joseph Gillen, Michael Schar, Jon-Fredrik Nielsen, Scott Peltier, Navid Seraji-Bozorgzad, Karl Landheer, Christoph Juchem, Brian Soher, Douglas C. Noll, Kejal Kantarci, Eva M. Ratai, Thomas H. Marecii, Peter B. Barker, Gulin Oz (2019) Across-vendor standardization of semi-LASER for single-voxel MRS at 3T, NMR in Biomedicine. e4218 https://doi.org/10.1002/nbm.4218

			[13] Gulin Oz, Dinesh K. Deelchand, Jannie P. Wijnen, Vladimir Mlynarik, Lijing Xin, Ralf Mekle, Ralph Noeske, Tom W.J. Scheenen, Ivan Tkac, the Experts' Working Group on Advanced Single Voxel 1H MRS (2020) Advanced single voxel 1H magnetic resonance spectroscopy techniques in humans: Experts' consensus recommendations, NMR in Biomedicine. e4236 https://doi.org/10.1002/nbm.4236

Laimab at 23:28, 2 November 2025

2025-11-02T23:28:37Z

← Older revision		Revision as of 23:28, 2 November 2025
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	Older methods and literature references will go here...		Older methods and literature references will go here...

			'''Examples of studies at CNI using in-vivo spectroscopy techniques include characterization of biomarkers following transcranial magnetic stimulation, and metabolite characterization for conditions such as substance addiction, pain, depression, and various forms of dementia. These studies illustrate integrated data acquisition and data processing tools accessible to the CNI user community which simplify the use and sharing of spectroscopy results in neuroimaging applications.'''

			'''[https://doi.org/10.1093/cercor/bhz332 Association between anterior cingulate neurochemical concentration and individual differences in hypnotizability] DeSouza DD, Stimpson K, Baltusis L, Sacchet MD, Gu M, Hurd R, Wu H, Yeomans DC, Williams N, Spiegel D. Association between anterior cingulate neurochemical concentration and individual differences in hypnotizability. Cerebral Cortex, Volume 30, Issue 6, June 2020, Pages 3644–3654, https://doi.org/10.1093/cercor/bhz332'''

			'''The CNI continues to support the research of its user community by developing and incorporating for general use new data acquisition and data analysis capabilities.'''

			'''[https://doi.org/10.1002/mrm.26691 GABA editing with macromolecule suppression using an improved MEGA-SPECIAL sequence] Gu M, Hurd R, Noeske R, Baltusis L, Hancock R, Sacchet MD, Gotlib IH, Chin FT, Spielman DM (2018) GABA editing with macromolecule suppression using an improved MEGA-SPECIAL sequence, Magnetic Resonance in Medicine 79:41-47 https://doi.org/10.1002/mrm.26691'''

			'''[https://doi.org/10.1016/j.neuroimage.2021.118430 Frequency drift in MR spectroscopy at 3T] Hui et al. Frequency drift in MR spectroscopy at 3T https://doi.org/10.1016/j.neuroimage.2021.118430'''




	[14] L. Ryner, J Sorenson, M.A. Thomas (1995) Localized 2D J-resolved H-1 MR spectroscopy: Strong coupling effects in vitro and in vivo, Magn. Reson. Imaging 13:853–869 https://doi.org/10.1016/0730-725X(95)00031-B		[14] L. Ryner, J Sorenson, M.A. Thomas (1995) Localized 2D J-resolved H-1 MR spectroscopy: Strong coupling effects in vitro and in vivo, Magn. Reson. Imaging 13:853–869 https://doi.org/10.1016/0730-725X(95)00031-B

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 |[[File:spectro-GABA-6.png|600px|thumb|left|Figure 5 MEGA-PRESS]]
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 =Processing and Analyzing GABA Data - non-Flywheel methods=

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	[[File:Spectro-editing-protocol-1.png\|none\|1000px\|spectro-editing-protocol-1]]		[[File:Spectro-editing-protocol-1.png\|none\|1000px\|spectro-editing-protocol-1]]

			{\|
			\|[[File:spectro-GABA-1.png\|600px\|thumb\|left\|Figure 1 MEGA-PRESS]]
			\|[[File:spectro-GABA-2.png\|600px\|thumb\|left\|Figure 2 MEGA-PRESS]]
			\|[[File:spectro-GABA-3.png\|600px\|thumb\|left\|Figure 3 MEGA-PRESS]]
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			{\|
			\|[[File:spectro-GABA-4.png\|600px\|thumb\|left\|Figure 4 MEGA-PRESS]]
			\|[[File:spectro-GABA-6.png\|600px\|thumb\|left\|Figure 5 MEGA-PRESS]]
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	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

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			[[File:Spectro-editing-protocol-1.png\|none\|1000px\|spectro-editing-protocol-1]]

	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

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	[[File:Spectro-protocol-1.png\|none\|1000px\|spectro-protocol-1]]		[[File:Spectro-protocol-1.png\|none\|1000px\|spectro-protocol-1]]

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	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

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2025-07-16T21:08:52Z

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			[[File:Spectro-protocol-1.png\|none\|1000px\|spectro-protocol-1]]

	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

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	[16] Krish Krishnamurthy (2013) CRAFT (complete reduction to amplitude frequency table) – robust and time efficient Bayesian approach for quantitative mixture analysis by NMR, Magn. Reson. Chem. 51: 821–829 https://doi.org/10.1002/mrc.4022		[16] Krish Krishnamurthy (2013) CRAFT (complete reduction to amplitude frequency table) – robust and time efficient Bayesian approach for quantitative mixture analysis by NMR, Magn. Reson. Chem. 51: 821–829 https://doi.org/10.1002/mrc.4022

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	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

Laimab at 20:59, 16 July 2025

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	[16] Krish Krishnamurthy (2013) CRAFT (complete reduction to amplitude frequency table) – robust and time efficient Bayesian approach for quantitative mixture analysis by NMR, Magn. Reson. Chem. 51: 821–829 https://doi.org/10.1002/mrc.4022		[16] Krish Krishnamurthy (2013) CRAFT (complete reduction to amplitude frequency table) – robust and time efficient Bayesian approach for quantitative mixture analysis by NMR, Magn. Reson. Chem. 51: 821–829 https://doi.org/10.1002/mrc.4022

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	=Processing and Analyzing GABA Data - non-Flywheel methods=		=Processing and Analyzing GABA Data - non-Flywheel methods=

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			{\|
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